Contains a list, and within each list element there is an object of class 'fdmat_single', holding in turn the fluorescence distributions. For each gate in the gating strategy where 'keepData' is set to TRUE there is one list element in 'fdmat'.
Slots
.DataA list with the same length as there are gates, i.e. with the same length as there are rows in the data frame in the slot
metadata.metadataA data frame holding the metadata, i.e. the parameters used to calculate the fluorescense intensities. Most of these parameters can be set in the file 'flowdex_settings.R'.
cyTagsAn object of
class-cyTagsgateStratAn object of
class-gatingStrategy_fdpDataA data frame holding the pheno-data, i.e. the data showing the raw sample-ID and the volume data stored in each single fcs file.
noteCharacter. Displaying comments like e.g. if
applyBandpasswas applied to data from a gate.
See also
Other Class documentation:
class-GatingSet_fd,
class-cyTags,
class-eventsPV,
class-fdmat_single,
class-gatingStrategy_fd